Hui Chong


Research assistant
ISTBI (Fudan University)

Email: huichong.me@gmail.com
Office: Room 2308, East Main Building, GuangHua Twin Towers, No. 220, Handan Road, Yangpu District, Shanghai, China
GitHub
Google Scholar
ORCID

Education
  • BSc Bioinformatics (2021), Huazhong University of Science and Technology

Research
  • Microbiome (Dec, 2019 - present): Applications of deep learning in microbiome data mining.

Publications
  • Han, Maozhen; Zha, Yuguo; Chong, Hui; Zhong, Chaofang; Ning, Kang; Utilizing microbiome approaches to assist source tracking, treatment and prevention of COVID-19: Review and assessment. In: Computational and structural biotechnology journal 2020
  • Kang, Kai; Chong, Hui; Ning, Kang; Meta-Prism 2.0: Enabling algorithm for ultra-fast, accurate and memory-efficient search among millions of microbial community samples. In: bioRxiv 2020
  • Chong, Hui; Yu, Qingyang; Zha, Yuguo; Xiong, Guangzhou; Wang, Nan; Sun, Chuqing; Wu, Sicheng; Chen, Weihua; Ning, Kang; Enabling technology for microbial source tracking based on transfer learning: From ontology-aware general knowledge to context-aware expert systems. In: bioRxiv 2021
  • Zha, Yuguo; Chong, Hui; Ning, Kang; Microbiome Sample Comparison and Search: From Pair-Wise Calculations to Model-Based Matching. In: Frontiers in Microbiology 2021
  • Zha, Yuguo; Chong, Hui; Qiu, Hao; Kang, Kai; Dun, Yuzheng; Chen, Zhixue; Cui, Xuefeng; Ning, Kang; Ontology-Aware Deep Learning Enables Ultrafast, Accurate and Interpretable Source Tracking among Sub-Million Microbial Community Samples from Hundreds of Niches. In: bioRxiv 2020
  • Bai, Tao; Zhu, Xue; Zhou, Xiang; Grathwohl, Denise; Yang, Pengshuo; Zha, Yuguo; Jin, Yu; Chong, Hui; Yu, Qingyang; Isberner, Nora; Reliable and Interpretable Mortality Prediction With Strong Foresight in COVID-19 Patients: An International Study From China and Germany. In: Frontiers in artificial intelligence 2021
  • Chong, Hui; Yu, Qingyang; Zha, Yuguo; Xiong, Guangzhou; Wang, Nan; Huang, Xinhe; Huang, Shijuan; Sun, Chuqing; Wu, Sicheng; Chen, Wei-Hua; EXPERT: Transfer Learning-enabled context-aware microbial source tracking. In: bioRxiv 2021
  • Zha, Yuguo; Chong, Hui; Yang, Pengshuo; Ning, Kang; Microbial dark matter: from discovery to applications. In: Genomics, Proteomics & Bioinformatics 2022
  • Zha, Yuguo; Chong, Hui; Qiu, Hao; Kang, Kai; Dun, Yuzheng; Chen, Zhixue; Cui, Xuefeng; Ning, Kang; Ontology-aware deep learning enables ultrafast and interpretable source tracking among sub-million microbial community samples from hundreds of niches. In: Genome medicine 2022